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You searched for: EV240045 (EV-TRACK ID)
Showing 1 - 6 of 6
Showing 1 - 6 of 6
Details | EV-TRACK ID | Experiment nr. | Species | Sample type | Separation protocol | First author | Year | EV-METRIC |
---|---|---|---|---|---|---|---|---|
EV240045 | 5/6 | Homo sapiens | HEK293T |
Filtration UF |
Pauwels J | 2025 | 75% | |
Study summaryFull title
All authors
Pauwels J, Van de Steene T, Van de Velde J, De Muyer F, De Pauw D, Baeke F, Eyckerman S, Gevaert K
Journal
Mol Cell Proteomics
Abstract
Extracellular vesicles (EVs), membrane-delimited nanovesicles that are secreted by cells into the ex (show more...)
EV-METRIC
75% (96th percentile of all experiments on the same sample type)
Reported
Not reported Not applicable EV-enriched
proteins
Protein analysis: analysis of three or more EV-enriched proteins
non
EV-enriched protein
Protein analysis: assessment of a non-EV-enriched protein
qualitative
and quantitative analysis
Particle analysis: implementation of both qualitative and quantitative methods. For the quantitative method, the reporting of measured EV concentration is expected.
electron
microscopy images
Particle analysis: inclusion of a widefield and close-up electron microscopy image
density
gradient
Separation method: density gradient, at least as validation of results attributed to EVs
EV density
Separation method: reporting of obtained EV density
ultracentrifugation specifics
Separation method: reporting of g-forces, duration and rotor type of ultracentrifugation steps
antibody
specifics
Protein analysis: antibody clone/reference number and dilution
lysate
preparation
Protein analysis: lysis buffer composition
Study dataSample type
Cell culture supernatant
Sample origin
Gag-eGFP OE
Focus vesicles
extracellular vesicle
Separation protocol
Separation protocol
Filtration
Ultrafiltration Protein markers
EV: Gag-eGFP
non-EV: bovine proteins Proteomics
yes
Show all info
Study aim
New methodological development/Identification of content (omics approaches)/Technical analysis comparing/optimizing EV-related methods
Sample
Species
Homo sapiens
Sample Type
Cell culture supernatant
EV-producing cells
HEK293T
EV-harvesting Medium
EV-depleted medium
Preparation of EDS
Commercial EDS
Separation Method
Filtration steps
0.2 or 0.22µm
Ultra filtration
Cut-off size (kDa)
300
Membrane type
Polyethersulfone (PES)
Characterization: Protein analysis
Protein Concentration Method
Not determined
Western Blot
Detected EV-associated proteins
Gag-eGFP
Not detected contaminants
Calnexin
Proteomics database
ProteomeXchange
Characterization: Lipid analysis
No
Characterization: Particle analysis
NTA
Report type
Mode
Reported size (nm)
128
EV concentration
Yes
Particle yield
particles per milliliter of starting sample: 1.50E+08
EM
EM-type
Scanning-EM/ Transmission-EM
Image type
Close-up, Wide-field
|
||||||||
EV240045 | 6/6 | Homo sapiens | HEK293T |
Filtration UF Tween wash |
Pauwels J | 2025 | 75% | |
Study summaryFull title
All authors
Pauwels J, Van de Steene T, Van de Velde J, De Muyer F, De Pauw D, Baeke F, Eyckerman S, Gevaert K
Journal
Mol Cell Proteomics
Abstract
Extracellular vesicles (EVs), membrane-delimited nanovesicles that are secreted by cells into the ex (show more...)
EV-METRIC
75% (96th percentile of all experiments on the same sample type)
Reported
Not reported Not applicable EV-enriched
proteins
Protein analysis: analysis of three or more EV-enriched proteins
non
EV-enriched protein
Protein analysis: assessment of a non-EV-enriched protein
qualitative
and quantitative analysis
Particle analysis: implementation of both qualitative and quantitative methods. For the quantitative method, the reporting of measured EV concentration is expected.
electron
microscopy images
Particle analysis: inclusion of a widefield and close-up electron microscopy image
density
gradient
Separation method: density gradient, at least as validation of results attributed to EVs
EV density
Separation method: reporting of obtained EV density
ultracentrifugation specifics
Separation method: reporting of g-forces, duration and rotor type of ultracentrifugation steps
antibody
specifics
Protein analysis: antibody clone/reference number and dilution
lysate
preparation
Protein analysis: lysis buffer composition
Study dataSample type
Cell culture supernatant
Sample origin
Gag-eGFP OE
Focus vesicles
extracellular vesicle
Separation protocol
Separation protocol
Filtration
Ultrafiltration Tween wash Protein markers
EV: Gag-eGFP
non-EV: bovine proteins Proteomics
yes
Show all info
Study aim
New methodological development/Identification of content (omics approaches)/Technical analysis comparing/optimizing EV-related methods
Sample
Species
Homo sapiens
Sample Type
Cell culture supernatant
EV-producing cells
HEK293T
EV-harvesting Medium
EV-depleted medium
Preparation of EDS
Commercial EDS
Separation Method
Filtration steps
0.2 or 0.22µm
Ultra filtration
Cut-off size (kDa)
300
Membrane type
Polyethersulfone (PES)
Other
Name other separation method
Tween wash
Characterization: Protein analysis
Protein Concentration Method
Not determined
Western Blot
Detected EV-associated proteins
Gag-eGFP
Not detected contaminants
Calnexin
Proteomics database
ProteomeXchange
Characterization: Lipid analysis
No
Characterization: Particle analysis
NTA
Report type
Mode
Reported size (nm)
156
EV concentration
Yes
Particle yield
particles per milliliter of starting sample: 8.30E+07
EM
EM-type
Scanning-EM/ Transmission-EM
Image type
Close-up, Wide-field
|
||||||||
EV240045 | 3/6 | Homo sapiens | MCF7 |
Filtration UF Tween wash |
Pauwels J | 2025 | 50% | |
Study summaryFull title
All authors
Pauwels J, Van de Steene T, Van de Velde J, De Muyer F, De Pauw D, Baeke F, Eyckerman S, Gevaert K
Journal
Mol Cell Proteomics
Abstract
Extracellular vesicles (EVs), membrane-delimited nanovesicles that are secreted by cells into the ex (show more...)
EV-METRIC
50% (87th percentile of all experiments on the same sample type)
Reported
Not reported Not applicable EV-enriched
proteins
Protein analysis: analysis of three or more EV-enriched proteins
non
EV-enriched protein
Protein analysis: assessment of a non-EV-enriched protein
qualitative
and quantitative analysis
Particle analysis: implementation of both qualitative and quantitative methods. For the quantitative method, the reporting of measured EV concentration is expected.
electron
microscopy images
Particle analysis: inclusion of a widefield and close-up electron microscopy image
density
gradient
Separation method: density gradient, at least as validation of results attributed to EVs
EV density
Separation method: reporting of obtained EV density
ultracentrifugation specifics
Separation method: reporting of g-forces, duration and rotor type of ultracentrifugation steps
antibody
specifics
Protein analysis: antibody clone/reference number and dilution
lysate
preparation
Protein analysis: lysis buffer composition
Study dataSample type
Cell culture supernatant
Sample origin
Control condition
Focus vesicles
extracellular vesicle
Separation protocol
Separation protocol
Filtration
Ultrafiltration Tween wash Protein markers
EV: None
non-EV: bovine proteins Proteomics
yes
Show all info
Study aim
New methodological development/Identification of content (omics approaches)/Technical analysis comparing/optimizing EV-related methods
Sample
Species
Homo sapiens
Sample Type
Cell culture supernatant
EV-producing cells
MCF7
EV-harvesting Medium
EV-depleted medium
Preparation of EDS
Commercial EDS
Cell viability (%)
95
Cell count
400000
Separation Method
Filtration steps
0.2 or 0.22µm
Ultra filtration
Cut-off size (kDa)
300
Membrane type
Polyethersulfone (PES)
Other
Name other separation method
Tween wash
Characterization: Protein analysis
Protein Concentration Method
Not determined
Proteomics database
ProteomeXchange
Characterization: Lipid analysis
No
Characterization: Particle analysis
NTA
Report type
Mode
Reported size (nm)
145
EV concentration
Yes
Particle yield
particles per milliliter of starting sample: 4.00E+08
|
||||||||
EV240045 | 4/6 | Homo sapiens | HEK293T |
(d)(U)C Filtration |
Pauwels J | 2025 | 43% | |
Study summaryFull title
All authors
Pauwels J, Van de Steene T, Van de Velde J, De Muyer F, De Pauw D, Baeke F, Eyckerman S, Gevaert K
Journal
Mol Cell Proteomics
Abstract
Extracellular vesicles (EVs), membrane-delimited nanovesicles that are secreted by cells into the ex (show more...)
EV-METRIC
43% (81st percentile of all experiments on the same sample type)
Reported
Not reported Not applicable EV-enriched
proteins
Protein analysis: analysis of three or more EV-enriched proteins
non
EV-enriched protein
Protein analysis: assessment of a non-EV-enriched protein
qualitative
and quantitative analysis
Particle analysis: implementation of both qualitative and quantitative methods. For the quantitative method, the reporting of measured EV concentration is expected.
electron
microscopy images
Particle analysis: inclusion of a widefield and close-up electron microscopy image
density
gradient
Separation method: density gradient, at least as validation of results attributed to EVs
EV density
Separation method: reporting of obtained EV density
ultracentrifugation specifics
Separation method: reporting of g-forces, duration and rotor type of ultracentrifugation steps
antibody
specifics
Protein analysis: antibody clone/reference number and dilution
lysate
preparation
Protein analysis: lysis buffer composition
Study dataSample type
Cell culture supernatant
Sample origin
Gag-eGFP OE
Focus vesicles
extracellular vesicle
Separation protocol
Separation protocol
(Differential) (ultra)centrifugation
Filtration Protein markers
EV: None
non-EV: bovine proteins Proteomics
yes
Show all info
Study aim
New methodological development/Identification of content (omics approaches)/Technical analysis comparing/optimizing EV-related methods
Sample
Species
Homo sapiens
Sample Type
Cell culture supernatant
EV-producing cells
HEK293T
EV-harvesting Medium
EV-depleted medium
Preparation of EDS
Commercial EDS
Separation Method
(Differential) (ultra)centrifugation
dUC: centrifugation steps
Below or equal to 800 g
Between 10,000 g and 50,000 g Between 100,000 g and 150,000 g Pelleting performed
Yes
Pelleting: rotor type
TLA-120.2
Pelleting: speed (g)
100000
Wash: volume per pellet (ml)
1
Wash: time (min)
90
Wash: Rotor Type
TLA-120.2
Wash: speed (g)
100000
Filtration steps
0.2 or 0.22µm
Characterization: Protein analysis
Protein Concentration Method
Not determined
Proteomics database
ProteomeXchange
Characterization: Lipid analysis
No
Characterization: Particle analysis
None
|
||||||||
EV240045 | 1/6 | Homo sapiens | Blood plasma |
Filtration UF |
Pauwels J | 2025 | 33% | |
Study summaryFull title
All authors
Pauwels J, Van de Steene T, Van de Velde J, De Muyer F, De Pauw D, Baeke F, Eyckerman S, Gevaert K
Journal
Mol Cell Proteomics
Abstract
Extracellular vesicles (EVs), membrane-delimited nanovesicles that are secreted by cells into the ex (show more...)
EV-METRIC
33% (64th percentile of all experiments on the same sample type)
Reported
Not reported Not applicable EV-enriched
proteins
Protein analysis: analysis of three or more EV-enriched proteins
non
EV-enriched protein
Protein analysis: assessment of a non-EV-enriched protein
qualitative
and quantitative analysis
Particle analysis: implementation of both qualitative and quantitative methods. For the quantitative method, the reporting of measured EV concentration is expected.
electron
microscopy images
Particle analysis: inclusion of a widefield and close-up electron microscopy image
density
gradient
Separation method: density gradient, at least as validation of results attributed to EVs
EV density
Separation method: reporting of obtained EV density
ultracentrifugation specifics
Separation method: reporting of g-forces, duration and rotor type of ultracentrifugation steps
antibody
specifics
Protein analysis: antibody clone/reference number and dilution
lysate
preparation
Protein analysis: lysis buffer composition
Study dataSample type
Blood plasma
Sample origin
Control condition
Focus vesicles
extracellular vesicle
Separation protocol
Separation protocol
Filtration
Ultrafiltration Protein markers
EV: None
non-EV: None Proteomics
yes
Show all info
Study aim
New methodological development/Identification of content (omics approaches)/Technical analysis comparing/optimizing EV-related methods
Sample
Species
Homo sapiens
Sample Type
Blood plasma
Separation Method
Filtration steps
0.2 or 0.22µm
Ultra filtration
Cut-off size (kDa)
300
Membrane type
Polyethersulfone (PES)
Characterization: Protein analysis
Protein Concentration Method
Not determined
Proteomics database
ProteomeXchange
Characterization: Lipid analysis
No
Characterization: Particle analysis
NTA
Report type
Mode
Reported size (nm)
146
EV concentration
Yes
Particle yield
particles per milliliter of starting sample: 2.60E+07
EM
EM-type
Transmission-EM
Image type
Close-up
|
||||||||
EV240045 | 2/6 | Homo sapiens | Urine |
Filtration UF |
Pauwels J | 2025 | 33% | |
Study summaryFull title
All authors
Pauwels J, Van de Steene T, Van de Velde J, De Muyer F, De Pauw D, Baeke F, Eyckerman S, Gevaert K
Journal
Mol Cell Proteomics
Abstract
Extracellular vesicles (EVs), membrane-delimited nanovesicles that are secreted by cells into the ex (show more...)
EV-METRIC
33% (64th percentile of all experiments on the same sample type)
Reported
Not reported Not applicable EV-enriched
proteins
Protein analysis: analysis of three or more EV-enriched proteins
non
EV-enriched protein
Protein analysis: assessment of a non-EV-enriched protein
qualitative
and quantitative analysis
Particle analysis: implementation of both qualitative and quantitative methods. For the quantitative method, the reporting of measured EV concentration is expected.
electron
microscopy images
Particle analysis: inclusion of a widefield and close-up electron microscopy image
density
gradient
Separation method: density gradient, at least as validation of results attributed to EVs
EV density
Separation method: reporting of obtained EV density
ultracentrifugation specifics
Separation method: reporting of g-forces, duration and rotor type of ultracentrifugation steps
antibody
specifics
Protein analysis: antibody clone/reference number and dilution
lysate
preparation
Protein analysis: lysis buffer composition
Study dataSample type
Urine
Sample origin
Control condition
Focus vesicles
extracellular vesicle
Separation protocol
Separation protocol
Filtration
Ultrafiltration Protein markers
EV: None
non-EV: Albumin/ Uromodulin Proteomics
yes
Show all info
Study aim
New methodological development/Identification of content (omics approaches)/Technical analysis comparing/optimizing EV-related methods
Sample
Species
Homo sapiens
Sample Type
Urine
Separation Method
Filtration steps
0.2 or 0.22µm
Ultra filtration
Cut-off size (kDa)
300
Membrane type
Polyethersulfone (PES)
Characterization: Protein analysis
Protein Concentration Method
Not determined
Proteomics database
ProteomeXchange
Characterization: Lipid analysis
No
Characterization: Particle analysis
None
|
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1 - 6 of 6 |
EV-TRACK ID | EV240045 | |||||
---|---|---|---|---|---|---|
species | Homo sapiens | |||||
sample type | Cell culture | Cell culture | Cell culture | Cell culture | Blood plasma | Urine |
cell type | HEK293T | HEK293T | MCF7 | HEK293T | NA | NA |
medium | EV-depleted medium | EV-depleted medium | EV-depleted medium | EV-depleted medium | NA | NA |
condition | Gag-eGFP OE | Gag-eGFP OE | Control condition | Gag-eGFP OE | Control condition | Control condition |
separation protocol | Filtration/ Ultrafiltration | Filtration/ Ultrafiltration/ Tween wash | Filtration/ Ultrafiltration/ Tween wash | dUC/ Filtration | Filtration/ Ultrafiltration | Filtration/ Ultrafiltration |
Exp. nr. | 5 | 6 | 3 | 4 | 1 | 2 |
EV-METRIC % | 75 | 75 | 50 | 43 | 33 | 33 |